1

Indexing Arbitrary-Length k-Mers in Sequencing Reads

Year:
2015
Language:
english
File:
PDF, 3.45 MB
english, 2015
3

Revisiting dictionary-based compression

Year:
2005
Language:
english
File:
PDF, 232 KB
english, 2005
4

FaStore – a space-saving solution for raw sequencing data

Year:
2018
Language:
english
File:
PDF, 513 KB
english, 2018
7

Context exhumation after the Burrows–Wheeler transform

Year:
2005
Language:
english
File:
PDF, 118 KB
english, 2005
10

Quadratic-time algorithm for a string constrained LCS problem

Year:
2012
Language:
english
File:
PDF, 117 KB
english, 2012
11

Disk-basedk-mer counting on a PC

Year:
2013
Language:
english
File:
PDF, 568 KB
english, 2013
14

Author Correction: FQSqueezer: k-mer-based compression of sequencing data

Year:
2020
Language:
english
File:
PDF, 613 KB
english, 2020
15

Indexes of Large Genome Collections on a PC

Year:
2014
Language:
english
File:
PDF, 888 KB
english, 2014
17

An algorithm for solving the longest increasing circular subsequence problem

Year:
2009
Language:
english
File:
PDF, 313 KB
english, 2009
18

GTC: how to maintain huge genotype collections in a compressed form

Year:
2018
Language:
english
File:
PDF, 493 KB
english, 2018
20

Speeding up transposition-invariant string matching

Year:
2006
Language:
english
File:
PDF, 187 KB
english, 2006
21

CoMeta: Classification of Metagenomes Using k-mers

Year:
2015
Language:
english
File:
PDF, 608 KB
english, 2015
23

DeltaComp: Fast and efficient compression of astronomical timelines

Year:
2018
Language:
english
File:
PDF, 878 KB
english, 2018
24

FQSqueezer: k-mer-based compression of sequencing data

Year:
2020
Language:
english
File:
PDF, 970 KB
english, 2020
25

RECKONER: read error corrector based on KMC

Year:
2017
Language:
english
File:
PDF, 91 KB
english, 2017
26

Correction: Indexes of Large Genome Collections on a PC

Year:
2015
Language:
english
File:
PDF, 66 KB
english, 2015
27

Second step algorithms in the Burrows–Wheeler compression algorithm

Year:
2002
Language:
english
File:
PDF, 138 KB
english, 2002
29

Improvements to Burrows–Wheeler compression algorithm

Year:
2000
Language:
english
File:
PDF, 145 KB
english, 2000
30

How to squeeze a lexicon

Year:
2001
Language:
english
File:
PDF, 149 KB
english, 2001
31

GDC 2: Compression of large collections of genomes

Year:
2015
Language:
english
File:
PDF, 514 KB
english, 2015
33

KMC 3: counting and manipulating k -mer statistics

Year:
2017
Language:
english
File:
PDF, 123 KB
english, 2017
34

Data compression for sequencing data

Year:
2013
Language:
english
File:
PDF, 466 KB
english, 2013